Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13427 and 13428 are separated by 245 nucleotides13428 and 13429 are separated by 192 nucleotides13429 and 13430 are separated by 68 nucleotides13430 and 13431 are separated by 308 nucleotides mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435 13427 mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1,654,681 to 1,660,965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1,661,158 to 1,662,498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1,662,567 to 1,663,555 13430 mRNA_5063: 13431 - K10301 FBXO21 F-box protein 21, at 1,663,864 to 1,665,707 13431
Group Condition mRNA_5059 mRNA_5060 mRNA_5061 mRNA_5062 mRNA_5063
13427 13428 13429 13430 13431
growth on ricinoleic acid YNB Glucose -0.5 +0.0 -0.6 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 -0.1 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.7 -0.3 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.3 +0.1 -0.0
auxotrophy Dropout Complete -0.1 -0.3 -0.1 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.7 +0.2 +0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.7 -0.3 +0.1 +0.0
auxotrophy YNB Glucose -0.2 -0.3 +0.0 -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.0 +0.2 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.0 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 -0.1 +0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 +0.1 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 -0.2 +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.1 -0.0 +0.2
growth on oleic acid YNB Glucose -0.0 +0.2 +0.0 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 -0.5 +0.1 +0.5
growth on ypd YPD +0.3 +0.1 +0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.4 +0.4 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 +0.3 +0.6 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.3 -0.0 +0.5 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.1 +0.4 +0.4 +0.4
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