Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13431 and 13432 are separated by 247 nucleotides13432 and 13433 are separated by 214 nucleotides13433 and 13434 are separated by 171 nucleotides13434 and 13435 are separated by 750 nucleotides mRNA_5063: 13431 - K10301 FBXO21 F-box protein 21, at 1,663,864 to 1,665,707 13431 mRNA_5064: 13432 - K00286 proC pyrroline-5-carboxylate reductase, at 1,665,955 to 1,667,428 13432 mRNA_5065: 13433 - HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253, at 1,667,643 to 1,669,072 13433 mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1,669,244 to 1,670,342 13434 mRNA_5067: 13435 - Hypothetical Protein, at 1,671,093 to 1,672,541 13435
Group Condition mRNA_5063 mRNA_5064 mRNA_5065 mRNA_5066 mRNA_5067
13431 13432 13433 13434 13435
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 N.D. -1.1 -0.7 -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. -0.6 -0.2 -2.0
auxotrophy Dropout Complete +0.0 N.D. -1.2 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.8 -0.7 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -1.1 -0.3 +0.0
auxotrophy YNB Glucose +0.1 N.D. -1.4 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -1.0 +0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.7 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -1.4 +0.7 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.2 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.1 +0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.4 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.3 -0.0 +0.2
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -1.0 +0.4 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.8 +0.4 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. -0.9 +0.7 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. -1.0 +0.9 +0.5
growth on ypd YPD +0.1 N.D. +0.7 +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.4 +0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. +0.0 +0.7 +0.1
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