Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13433 and 13434 are separated by 171 nucleotides
13434 and 13435 are separated by 750 nucleotides
13435 and 13436 are separated by 476 nucleotides
13436 and 13437 are separated by 600 nucleotides
mRNA_5065: 13433 - HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253, at 1,667,643 to 1,669,072
13433
mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1,669,244 to 1,670,342
13434
mRNA_5067: 13435 - Hypothetical Protein, at 1,671,093 to 1,672,541
13435
mRNA_5068: 13436 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,673,018 to 1,675,437
13436
mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1,676,038 to 1,676,601
13437
Group
Condition
mRNA
_5065
mRNA
_5066
mRNA
_5067
mRNA
_5068
mRNA
_5069
13433
13434
13435
13436
13437
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.2
-2.0
+0.2
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.7
-1.4
+0.0
-0.3
auxotrophy
Dropout Complete
-1.2
-0.1
-0.2
-0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.3
+0.0
+0.1
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.7
-0.2
+0.2
-0.4
auxotrophy
YNB Glucose
-1.4
+0.2
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.7
+0.2
-0.2
-0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.0
-0.5
-0.1
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-1.0
+0.2
-0.2
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
+0.7
-0.0
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
-0.5
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
+0.9
+0.5
-0.3
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
+0.4
+0.8
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
+0.7
+0.6
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.1
-0.3
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
+0.4
+1.0
-0.2
-0.3
growth on oleic acid
YNB Glucose
+0.1
+0.4
-0.1
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
+0.2
+0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.7
+0.1
-0.5
+0.3
growth on oleic acid
YNB Oleic Acid
+0.4
+0.4
+0.1
-0.2
+0.3
growth on ypd
YPD
+0.7
+0.3
-0.3
+0.1
+0.3
remove
mRNA_5065
plot
remove
mRNA_5066
plot
remove
mRNA_5067
remove
mRNA_5068
plot
remove
mRNA_5069
plot