Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13434 and 13435 are separated by 750 nucleotides13435 and 13436 are separated by 476 nucleotides13436 and 13437 are separated by 600 nucleotides13437 and 13438 are separated by 233 nucleotides mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1,669,244 to 1,670,342 13434 mRNA_5067: 13435 - Hypothetical Protein, at 1,671,093 to 1,672,541 13435 mRNA_5068: 13436 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,673,018 to 1,675,437 13436 mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1,676,038 to 1,676,601 13437 mRNA_5070: 13438 - KOG3346 Phosphatidylethanolamine binding protein, at 1,676,835 to 1,677,879 13438
Group Condition mRNA_5066 mRNA_5067 mRNA_5068 mRNA_5069 mRNA_5070
13434 13435 13436 13437 13438
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -2.0 +0.2 -1.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -1.4 +0.0 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.5 -0.1 -0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.2 +0.2 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.0 +0.1 -0.8 N.D.
auxotrophy Dropout Complete -0.1 -0.2 -0.3 -0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.2 -0.4 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.1 +0.0 N.D.
auxotrophy YNB Glucose +0.2 -0.1 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.1 -0.3 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 -0.4 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.0 -0.5 +0.1 N.D.
growth on ypd YPD +0.3 -0.3 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 +0.5 -0.3 -0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.4 +0.1 -0.2 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.1 -0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.8 -0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.6 -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +1.0 -0.2 -0.3 N.D.
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