Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13436 and 13437 are separated by 600 nucleotides
13437 and 13438 are separated by 233 nucleotides
13438 and 13439 are separated by 318 nucleotides
13439 and 13440 are separated by 1244 nucleotides
mRNA_5068: 13436 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,673,018 to 1,675,437
13436
mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1,676,038 to 1,676,601
13437
mRNA_5070: 13438 - KOG3346 Phosphatidylethanolamine binding protein, at 1,676,835 to 1,677,879
13438
mRNA_5071: 13439 - KOG3038 Histone acetyltransferase SAGA associated factor SGF29, at 1,678,198 to 1,679,552
13439
mRNA_5072: 13440 - K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha, at 1,680,797 to 1,682,258
13440
Group
Condition
mRNA
_5068
mRNA
_5069
mRNA
_5070
mRNA
_5071
mRNA
_5072
13436
13437
13438
13439
13440
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.4
N.D.
-1.8
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-1.0
N.D.
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.4
-0.3
N.D.
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.3
N.D.
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.7
N.D.
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.6
N.D.
+0.7
-0.1
growth on oleic acid
YNB Glucose
-0.4
+0.2
N.D.
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
N.D.
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.8
N.D.
+1.2
-0.4
auxotrophy
YNB Glucose
-0.1
-0.3
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
N.D.
+0.5
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
N.D.
+0.6
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
N.D.
+0.3
+0.3
growth on ypd
YPD
+0.1
+0.3
N.D.
+0.1
-0.1
auxotrophy
Dropout Complete
-0.3
-0.3
N.D.
+0.6
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.1
N.D.
+0.5
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.3
N.D.
+0.6
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
N.D.
+0.6
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
N.D.
+0.5
+0.6
growth on oleic acid
YNB Oleic Acid
-0.2
+0.3
N.D.
+1.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
N.D.
+1.6
+0.2
remove
mRNA_5068
plot
remove
mRNA_5069
plot
remove
mRNA_5070
remove
mRNA_5071
plot
remove
mRNA_5072
plot