Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13437 and 13438 are separated by 233 nucleotides13438 and 13439 are separated by 318 nucleotides13439 and 13440 are separated by 1244 nucleotides13440 and 13441 are separated by 2076 nucleotides mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1,676,038 to 1,676,601 13437 mRNA_5070: 13438 - KOG3346 Phosphatidylethanolamine binding protein, at 1,676,835 to 1,677,879 13438 mRNA_5071: 13439 - KOG3038 Histone acetyltransferase SAGA associated factor SGF29, at 1,678,198 to 1,679,552 13439 mRNA_5072: 13440 - K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha, at 1,680,797 to 1,682,258 13440 mRNA_5073: 13441 - K12843 PRPF3, PRP3 U4/U6 small nuclear ribonucleoprotein PRP3, at 1,684,335 to 1,686,538 13441
Group Condition mRNA_5069 mRNA_5070 mRNA_5071 mRNA_5072 mRNA_5073
13437 13438 13439 13440 13441
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -1.8 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.0 N.D. -0.5 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.2 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.7 N.D. +0.0 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. +0.7 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 N.D. +1.2 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. +0.6 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.3 +0.3 N.D.
auxotrophy YNB Glucose -0.3 N.D. +0.3 +0.2 N.D.
growth on ypd YPD +0.3 N.D. +0.1 -0.1 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.5 +0.1 N.D.
auxotrophy Dropout Complete -0.3 N.D. +0.6 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.5 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.6 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.5 +0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.6 +0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.3 N.D. +1.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +1.6 +0.2 N.D.
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