Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13439 and 13440 are separated by 1244 nucleotides13440 and 13441 are separated by 2076 nucleotides13441 and 13442 are separated by 209 nucleotides13442 and 13443 are separated by 195 nucleotides mRNA_5071: 13439 - KOG3038 Histone acetyltransferase SAGA associated factor SGF29, at 1,678,198 to 1,679,552 13439 mRNA_5072: 13440 - K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha, at 1,680,797 to 1,682,258 13440 mRNA_5073: 13441 - K12843 PRPF3, PRP3 U4/U6 small nuclear ribonucleoprotein PRP3, at 1,684,335 to 1,686,538 13441 mRNA_5074: 13442 - KOG1426 FOG RCC1 domain, at 1,686,748 to 1,688,020 13442 mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1,688,216 to 1,690,274 13443
Group Condition mRNA_5071 mRNA_5072 mRNA_5073 mRNA_5074 mRNA_5075
13439 13440 13441 13442 13443
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.8 +0.1 N.D. -0.2 -3.0
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. +0.0 -2.6
growth on oleic acid YNB Glucose +0.3 -0.1 N.D. +0.1 -2.2
auxotrophy YNB Glucose +0.3 +0.2 N.D. +0.3 -2.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 N.D. -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 N.D. -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.0 N.D. -0.2 -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 N.D. -0.1 -1.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.7 N.D. +0.2 -2.3
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.6 N.D. +0.2 -2.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.5 N.D. +0.0 -1.9
facs on lipid accumulation Sorted Low BODIPY Gate +1.2 -0.4 N.D. -0.2 -1.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.1 N.D. -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 N.D. -0.3 +0.3
growth on ypd YPD +0.1 -0.1 N.D. -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 N.D. -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.3 N.D. -0.1 +0.1
auxotrophy Dropout Complete +0.6 +0.3 N.D. +0.0 -0.1
growth on oleic acid YNB Oleic Acid +1.0 +0.1 N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.4 N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.6 +0.2 N.D. +0.2 +1.1
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