Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13442 and 13443 are separated by 195 nucleotides13443 and 13444 are separated by 176 nucleotides13444 and 13445 are separated by 289 nucleotides13445 and 13446 are separated by 685 nucleotides mRNA_5074: 13442 - KOG1426 FOG RCC1 domain, at 1,686,748 to 1,688,020 13442 mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1,688,216 to 1,690,274 13443 mRNA_5076: 13444 - K00588 E2.1.1.104 caffeoyl-CoA O-methyltransferase, at 1,690,451 to 1,691,745 13444 mRNA_5077: 13445 - KOG1663 O-methyltransferase, at 1,692,035 to 1,693,349 13445 mRNA_5078: 13446 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1,694,035 to 1,697,967 13446
Group Condition mRNA_5074 mRNA_5075 mRNA_5076 mRNA_5077 mRNA_5078
13442 13443 13444 13445 13446
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -2.3 +0.0 -1.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -1.3 -0.8 -1.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.4 -0.1 -1.5 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -2.6 -0.0 -0.2 N.D.
auxotrophy YNB Glucose +0.3 -2.4 +0.0 -0.6 N.D.
growth on oleic acid YNB Glucose +0.1 -2.2 -0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -2.1 -0.2 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.6 -0.4 -1.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -1.9 -0.0 -0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.5 -1.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.0 -0.9 N.D.
growth on ypd YPD -0.0 -0.0 -0.3 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -3.0 +0.2 +2.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.7 +0.1 N.D.
auxotrophy Dropout Complete +0.0 -0.1 -0.2 -0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 +0.1 -1.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.0 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -1.5 +0.2 +2.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.5 +0.4 +1.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +1.1 +0.4 +0.1 N.D.
remove
mRNA_5074
plot
remove
mRNA_5075
plot
remove
mRNA_5076
remove
mRNA_5077
plot
remove
mRNA_5078
plot