Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13445 and 13446 are separated by 685 nucleotides13446 and 13447 are separated by 148 nucleotides13447 and 13448 are separated by 204 nucleotides13448 and 13449 are separated by 204 nucleotides mRNA_5077: 13445 - KOG1663 O-methyltransferase, at 1,692,035 to 1,693,349 13445 mRNA_5078: 13446 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1,694,035 to 1,697,967 13446 mRNA_5079: 13447 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 1,698,116 to 1,699,686 13447 mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1,699,891 to 1,701,497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1,701,702 to 1,705,465 13449
Group Condition mRNA_5077 mRNA_5078 mRNA_5079 mRNA_5080 mRNA_5081
13445 13446 13447 13448 13449
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.1 -3.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.5 N.D. -0.3 -1.6 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.2 N.D. -1.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.0 N.D. -0.7 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -1.2 N.D. +0.3 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.4 -0.8 -0.1
auxotrophy YNB Glucose -0.6 N.D. -0.4 +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -1.0 N.D. +0.6 -0.5 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.2 -0.7 -0.3
growth on ypd YPD -0.7 N.D. -0.4 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 N.D. -0.2 +0.3 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.9 N.D. +0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.1 -0.0 +0.1
auxotrophy Dropout Complete -0.8 N.D. -0.1 +0.3 +0.2
growth on oleic acid YNB Glucose -0.2 N.D. +0.4 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. -0.3 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 +0.5 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.5 N.D. +0.3 +1.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +2.0 N.D. +0.0 +0.9 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +2.2 N.D. +0.1 +1.6 -0.3
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