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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13450 and 13451 are separated by 610 nucleotides
13451 and 13452 are separated by 594 nucleotides
13452 and 13453 are separated by 461 nucleotides
13453 and 13454 are separated by 445 nucleotides
mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1,706,172 to 1,709,244
13450
mRNA_5083: 13451 - Hypothetical Protein, at 1,709,855 to 1,711,486
13451
mRNA_5084: 13452 - Hypothetical Protein, at 1,712,081 to 1,713,113
13452
mRNA_5085: 13453 - K03114 SWE1 mitosis inhibitor protein kinase SWE1, at 1,713,575 to 1,718,453
13453
mRNA_5086: 13454 - Hypothetical Protein, at 1,718,899 to 1,719,393
13454
Group
Condition
mRNA
_5082
mRNA
_5083
mRNA
_5084
mRNA
_5085
mRNA
_5086
13450
13451
13452
13453
13454
ypd buoyancy
40 hrs No Buoyancy Separation
-2.0
-1.2
-0.3
-0.8
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.7
-2.4
+2.1
-0.8
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.6
-0.4
-1.8
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.9
-0.1
-0.3
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-1.2
-0.2
-0.1
-0.9
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.6
-2.0
-0.6
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.5
-0.2
-0.8
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.1
+0.1
-1.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.7
-0.2
+0.1
-0.3
N.D.
auxotrophy
Dropout Complete
-0.3
-0.4
+0.3
-0.7
N.D.
auxotrophy
YNB Glucose
-0.4
+0.1
+0.1
-0.9
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.0
-0.1
-0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
-0.2
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
+0.2
-0.1
-0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.4
+0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.8
-0.8
+0.3
N.D.
growth on oleic acid
YNB Glucose
+0.2
-0.1
-0.1
+0.2
N.D.
growth on ypd
YPD
+0.6
-0.4
-0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.5
+0.4
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.7
+0.4
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.3
+1.6
-0.2
N.D.
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