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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13452 and 13453 are separated by 461 nucleotides
13453 and 13454 are separated by 445 nucleotides
13454 and 13455 are separated by 584 nucleotides
13455 and 13456 are separated by 1037 nucleotides
mRNA_5084: 13452 - Hypothetical Protein, at 1,712,081 to 1,713,113
13452
mRNA_5085: 13453 - K03114 SWE1 mitosis inhibitor protein kinase SWE1, at 1,713,575 to 1,718,453
13453
mRNA_5086: 13454 - Hypothetical Protein, at 1,718,899 to 1,719,393
13454
mRNA_5087: 13455 - K06890 K06890 uncharacterized protein, at 1,719,978 to 1,721,212
13455
mRNA_5088: 13456 - BLAST cytochrome P450 [Coprinopsis cinerea okayama7#130], at 1,722,250 to 1,723,721
13456
Group
Condition
mRNA
_5084
mRNA
_5085
mRNA
_5086
mRNA
_5087
mRNA
_5088
13452
13453
13454
13455
13456
facs on lipid accumulation
Sorted High BODIPY Gate
-2.0
-0.6
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-1.8
N.D.
+0.0
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
N.D.
+0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.9
N.D.
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-1.1
N.D.
-0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.8
N.D.
-0.1
+0.5
auxotrophy
YNB Glucose
+0.1
-0.9
N.D.
-0.3
+0.6
auxotrophy
Dropout Complete
+0.3
-0.7
N.D.
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
N.D.
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
N.D.
+0.1
-0.1
growth on ypd
YPD
-0.1
+0.1
N.D.
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.3
N.D.
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.6
N.D.
+0.5
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.5
N.D.
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.1
N.D.
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
+0.3
N.D.
+0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
N.D.
+0.5
+0.0
growth on oleic acid
YNB Glucose
-0.1
+0.2
N.D.
+0.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+2.1
-0.8
N.D.
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.5
N.D.
+0.5
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.6
-0.2
N.D.
+0.4
+0.4
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