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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13453 and 13454 are separated by 445 nucleotides
13454 and 13455 are separated by 584 nucleotides
13455 and 13456 are separated by 1037 nucleotides
13456 and 13457 are separated by 1134 nucleotides
mRNA_5085: 13453 - K03114 SWE1 mitosis inhibitor protein kinase SWE1, at 1,713,575 to 1,718,453
13453
mRNA_5086: 13454 - Hypothetical Protein, at 1,718,899 to 1,719,393
13454
mRNA_5087: 13455 - K06890 K06890 uncharacterized protein, at 1,719,978 to 1,721,212
13455
mRNA_5088: 13456 - BLAST cytochrome P450 [Coprinopsis cinerea okayama7#130], at 1,722,250 to 1,723,721
13456
mRNA_5089: 13457 - Hypothetical Protein, at 1,724,856 to 1,725,762
13457
Group
Condition
mRNA
_5085
mRNA
_5086
mRNA
_5087
mRNA
_5088
mRNA
_5089
13453
13454
13455
13456
13457
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
N.D.
+0.2
-0.4
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.8
N.D.
+0.0
+0.5
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
N.D.
-0.4
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.9
N.D.
+0.0
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-1.1
N.D.
-0.2
+0.4
+0.1
auxotrophy
YNB Glucose
-0.9
N.D.
-0.3
+0.6
-0.2
auxotrophy
Dropout Complete
-0.7
N.D.
-0.2
+0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
N.D.
-0.1
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
+0.1
-0.1
+0.0
growth on ypd
YPD
+0.1
N.D.
-0.0
-0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
-0.1
+0.2
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
+0.1
+0.6
+0.1
growth on oleic acid
YNB Oleic Acid
-0.6
N.D.
+0.5
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
N.D.
+0.5
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
+0.4
+0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.5
+0.0
-0.0
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.3
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
N.D.
+0.2
+0.5
-0.1
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