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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13455 and 13456 are separated by 1037 nucleotides
13456 and 13457 are separated by 1134 nucleotides
13457 and 13458 are separated by 376 nucleotides
13458 and 13459 are separated by 388 nucleotides
mRNA_5087: 13455 - K06890 K06890 uncharacterized protein, at 1,719,978 to 1,721,212
13455
mRNA_5088: 13456 - BLAST cytochrome P450 [Coprinopsis cinerea okayama7#130], at 1,722,250 to 1,723,721
13456
mRNA_5089: 13457 - Hypothetical Protein, at 1,724,856 to 1,725,762
13457
mRNA_5090: 13458 - K08900 BCS1 mitochondrial chaperone BCS1, at 1,726,139 to 1,727,985
13458
mRNA_5091: 13459 - Hypothetical Protein, at 1,728,374 to 1,730,110
13459
Group
Condition
mRNA
_5087
mRNA
_5088
mRNA
_5089
mRNA
_5090
mRNA
_5091
13455
13456
13457
13458
13459
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.4
-0.8
N.D.
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
+0.2
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
+0.0
+0.2
-0.2
N.D.
-0.2
growth on ypd
YPD
-0.0
-0.0
-0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.1
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.5
-0.1
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
+0.5
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.5
-0.2
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
+0.2
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.0
-0.0
N.D.
-0.1
growth on oleic acid
YNB Glucose
+0.3
+0.2
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.5
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.4
-0.1
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.5
+0.3
+0.1
N.D.
-0.0
auxotrophy
Dropout Complete
-0.2
+0.3
-0.0
N.D.
+0.9
auxotrophy
YNB Glucose
-0.3
+0.6
-0.2
N.D.
+1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.5
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
+0.1
N.D.
+1.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.6
+0.1
N.D.
+0.7
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