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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13457 and 13458 are separated by 376 nucleotides
13458 and 13459 are separated by 388 nucleotides
13459 and 13460 are separated by 282 nucleotides
13460 and 13461 are separated by 468 nucleotides
mRNA_5089: 13457 - Hypothetical Protein, at 1,724,856 to 1,725,762
13457
mRNA_5090: 13458 - K08900 BCS1 mitochondrial chaperone BCS1, at 1,726,139 to 1,727,985
13458
mRNA_5091: 13459 - Hypothetical Protein, at 1,728,374 to 1,730,110
13459
mRNA_5092: 13460 - HMMPfam-RTA1 like protein-PF04479, at 1,730,393 to 1,731,831
13460
mRNA_5093: 13461 - Hypothetical Protein, at 1,732,300 to 1,732,990
13461
Group
Condition
mRNA
_5089
mRNA
_5090
mRNA
_5091
mRNA
_5092
mRNA
_5093
13457
13458
13459
13460
13461
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
N.D.
-0.4
-0.3
-1.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
-0.0
-0.4
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
-0.1
+0.0
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
N.D.
-0.4
-0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
-0.1
+0.2
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
+0.2
+0.2
-0.6
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
-0.2
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
-0.3
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.1
+0.5
-0.5
growth on ypd
YPD
-0.2
N.D.
+0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.2
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
-0.0
+0.2
+0.2
growth on oleic acid
YNB Glucose
+0.0
N.D.
-0.1
-0.1
+0.7
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
-0.0
-0.1
+0.5
auxotrophy
Dropout Complete
-0.0
N.D.
+0.9
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
+0.7
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
+0.3
+0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
-0.2
+0.1
+1.1
auxotrophy
YNB Glucose
-0.2
N.D.
+1.0
+0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
+0.0
-0.0
+1.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
+1.0
-0.1
+0.5
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