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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13459 and 13460 are separated by 282 nucleotides
13460 and 13461 are separated by 468 nucleotides
13461 and 13462 are separated by 474 nucleotides
13462 and 13463 are separated by 136 nucleotides
mRNA_5091: 13459 - Hypothetical Protein, at 1,728,374 to 1,730,110
13459
mRNA_5092: 13460 - HMMPfam-RTA1 like protein-PF04479, at 1,730,393 to 1,731,831
13460
mRNA_5093: 13461 - Hypothetical Protein, at 1,732,300 to 1,732,990
13461
mRNA_5094: 13462 - K10259 MET30 F-box and WD-40 domain protein MET30, at 1,733,465 to 1,736,154
13462
mRNA_5095: 13463 - K03106 SRP54, ffh signal recognition particle subunit SRP54, at 1,736,291 to 1,738,860
13463
Group
Condition
mRNA
_5091
mRNA
_5092
mRNA
_5093
mRNA
_5094
mRNA
_5095
13459
13460
13461
13462
13463
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.3
-1.6
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.4
-0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.4
-0.5
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.2
-0.8
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.6
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
-0.5
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.0
+0.4
N.D.
N.D.
growth on ypd
YPD
+0.1
+0.3
-0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.1
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.2
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
+0.5
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.7
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.1
-0.1
N.D.
N.D.
auxotrophy
Dropout Complete
+0.9
-0.0
-0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.2
+0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+1.1
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.0
+1.0
N.D.
N.D.
auxotrophy
YNB Glucose
+1.0
+0.2
+0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+1.0
-0.1
+0.5
N.D.
N.D.
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