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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13465 and 13466 are separated by 882 nucleotides
13466 and 13467 are separated by 847 nucleotides
13467 and 13468 are separated by 144 nucleotides
13468 and 13469 are separated by 446 nucleotides
mRNA_5097: 13465 - Hypothetical Protein, at 1,745,073 to 1,746,754
13465
mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1,747,637 to 1,748,369
13466
mRNA_5099: 13467 - Hypothetical Protein, at 1,749,217 to 1,750,028
13467
mRNA_5100: 13468 - Hypothetical Protein, at 1,750,173 to 1,750,911
13468
mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1,751,358 to 1,752,700
13469
Group
Condition
mRNA
_5097
mRNA
_5098
mRNA
_5099
mRNA
_5100
mRNA
_5101
13465
13466
13467
13468
13469
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.2
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.5
+0.1
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.0
+0.2
-1.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.1
-0.0
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.1
+0.0
-0.4
growth on ypd
YPD
+0.1
-0.3
-0.3
+0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.5
-0.1
+0.6
+0.4
auxotrophy
Dropout Complete
-0.4
-0.1
+0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.1
+0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.5
+0.1
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
+0.0
+0.0
+0.0
growth on ricinoleic acid
YNB Glucose
+0.0
+0.6
+0.0
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.2
+0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
+0.3
+0.2
-0.5
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.4
-0.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+1.0
+0.1
-0.0
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.0
+0.1
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.3
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose
-0.2
+0.4
+0.1
-0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+1.6
+0.3
-0.4
+0.4
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