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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13466 and 13467 are separated by 847 nucleotides
13467 and 13468 are separated by 144 nucleotides
13468 and 13469 are separated by 446 nucleotides
13469 and 13470 are separated by 928 nucleotides
mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1,747,637 to 1,748,369
13466
mRNA_5099: 13467 - Hypothetical Protein, at 1,749,217 to 1,750,028
13467
mRNA_5100: 13468 - Hypothetical Protein, at 1,750,173 to 1,750,911
13468
mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1,751,358 to 1,752,700
13469
mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1,753,629 to 1,757,881
13470
Group
Condition
mRNA
_5098
mRNA
_5099
mRNA
_5100
mRNA
_5101
mRNA
_5102
13466
13467
13468
13469
13470
growth on ypd
YPD
-0.3
-0.3
+0.3
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.0
+0.2
-1.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.1
+0.6
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
+0.0
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
+0.0
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.2
-0.2
-0.6
+0.9
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
+0.1
-0.0
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.1
+0.2
+0.2
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
+0.2
-0.5
+0.9
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
+0.1
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
-0.0
-0.0
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.3
-0.2
+0.2
+0.7
growth on ricinoleic acid
YNB Glucose
+0.6
+0.0
-0.3
-0.3
+0.9
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
+0.0
+0.0
+0.7
auxotrophy
Dropout Complete
-0.1
+0.2
-0.1
+0.3
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.1
+0.1
-0.3
+1.8
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
-0.5
+0.5
+0.9
auxotrophy
YNB Glucose
+0.4
+0.1
-0.0
+0.3
+0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.6
+0.3
-0.4
+0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.1
+0.3
-0.2
+1.8
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