Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13468 and 13469 are separated by 446 nucleotides
13469 and 13470 are separated by 928 nucleotides
13470 and 13471 are separated by 789 nucleotides
13471 and 13472 are separated by 729 nucleotides
mRNA_5100: 13468 - Hypothetical Protein, at 1,750,173 to 1,750,911
13468
mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1,751,358 to 1,752,700
13469
mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1,753,629 to 1,757,881
13470
mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1,758,671 to 1,763,554
13471
mRNA_5104: 13472 - Hypothetical Protein, at 1,764,284 to 1,764,496
13472
Group
Condition
mRNA
_5100
mRNA
_5101
mRNA
_5102
mRNA
_5103
mRNA
_5104
13468
13469
13470
13471
13472
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
-0.3
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-1.0
+0.2
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.1
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
-0.1
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.4
+0.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.4
+0.3
-0.0
N.D.
growth on oleic acid
YNB Glucose
-0.2
-0.6
+0.9
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.3
+0.9
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.4
-0.4
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
+0.3
+0.1
N.D.
growth on ypd
YPD
+0.3
-0.2
+0.1
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.0
+0.6
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.2
+0.7
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.5
+0.9
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.5
+0.5
+0.9
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.0
+0.7
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
+0.5
+0.1
N.D.
auxotrophy
Dropout Complete
-0.1
+0.3
+0.7
+0.2
N.D.
auxotrophy
YNB Glucose
-0.0
+0.3
+0.8
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.3
+1.8
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.2
+1.8
-0.0
N.D.
remove
mRNA_5100
plot
remove
mRNA_5101
plot
remove
mRNA_5102
remove
mRNA_5103
plot
remove
mRNA_5104
plot