Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13469 and 13470 are separated by 928 nucleotides13470 and 13471 are separated by 789 nucleotides13471 and 13472 are separated by 729 nucleotides13472 and 13473 are separated by 724 nucleotides mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1,751,358 to 1,752,700 13469 mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1,753,629 to 1,757,881 13470 mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1,758,671 to 1,763,554 13471 mRNA_5104: 13472 - Hypothetical Protein, at 1,764,284 to 1,764,496 13472 mRNA_5105: 13473 - HMMPfam-Frequency clock protein-PF09421, at 1,765,221 to 1,768,687 13473
Group Condition mRNA_5101 mRNA_5102 mRNA_5103 mRNA_5104 mRNA_5105
13469 13470 13471 13472 13473
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.3 -0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -1.0 +0.2 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.3 -0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.0 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 +0.1 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.4 -0.1 N.D. +0.5
growth on ypd YPD -0.2 +0.1 +0.3 N.D. +0.3
growth on oleic acid YNB Glucose -0.6 +0.9 +0.0 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.9 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.6 +0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 -0.1 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.7 +0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.9 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.5 +0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.7 +0.2 N.D. -0.0
auxotrophy Dropout Complete +0.3 +0.7 +0.2 N.D. +0.2
auxotrophy YNB Glucose +0.3 +0.8 +0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.9 +0.0 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +1.8 -0.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +1.8 +0.2 N.D. +0.0
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