Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13474 and 13475 are separated by 176 nucleotides13475 and 13476 are separated by 147 nucleotides13476 and 13477 are separated by 383 nucleotides13477 and 13478 are separated by 262 nucleotides mRNA_5106: 13474 - K12819 SLU7 pre-mRNA-processing factor SLU7, at 1,769,315 to 1,772,134 13474 mRNA_5107: 13475 - K03130 TAF5 transcription initiation factor TFIID subunit 5, at 1,772,311 to 1,779,712 13475 mRNA_5108: 13476 - BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'], at 1,779,860 to 1,781,501 13476 mRNA_5109: 13477 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 1,781,885 to 1,783,353 13477 mRNA_5110: 13478 - HMMPfam-Phosphotyrosyl phosphate activator (PTPA) protein-PF03095,SUPERFAMILY--SSF140984, at 1,783,616 to 1,785,108 13478
Group Condition mRNA_5106 mRNA_5107 mRNA_5108 mRNA_5109 mRNA_5110
13474 13475 13476 13477 13478
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.7 -1.1 N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.7 -1.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.7 -0.5 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.8 -0.1 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.4 -0.7 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.6 -0.7 N.D. -0.2
auxotrophy YNB Glucose -0.1 -0.8 -0.0 N.D. -0.2
growth on oleic acid YNB Glucose +0.2 -0.6 -0.3 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 -1.2 N.D. -0.0
auxotrophy Dropout Complete -0.0 -0.9 +0.1 N.D. -0.2
growth on ypd YPD -0.2 -0.2 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.5 N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.6 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 +0.9 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.3 -0.0 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.8 +1.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.4 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.1 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.4 +0.4 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 +0.5 N.D. +0.3
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