Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13475 and 13476 are separated by 147 nucleotides13476 and 13477 are separated by 383 nucleotides13477 and 13478 are separated by 262 nucleotides13478 and 13479 are separated by 263 nucleotides mRNA_5107: 13475 - K03130 TAF5 transcription initiation factor TFIID subunit 5, at 1,772,311 to 1,779,712 13475 mRNA_5108: 13476 - BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'], at 1,779,860 to 1,781,501 13476 mRNA_5109: 13477 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 1,781,885 to 1,783,353 13477 mRNA_5110: 13478 - HMMPfam-Phosphotyrosyl phosphate activator (PTPA) protein-PF03095,SUPERFAMILY--SSF140984, at 1,783,616 to 1,785,108 13478 mRNA_5111: 13479 - K19881 BUD7, BCH1 Chs5-Arf1p-binding protein BUD7/BCH1, at 1,785,372 to 1,788,381 13479
Group Condition mRNA_5107 mRNA_5108 mRNA_5109 mRNA_5110 mRNA_5111
13475 13476 13477 13478 13479
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -1.1 N.D. -0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.2 N.D. -0.0 -1.0
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.5 N.D. -0.3 +0.3
growth on ricinoleic acid YNB Glucose -0.8 -0.1 N.D. -0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -1.0 N.D. -0.3 +0.8
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.7 N.D. -0.2 +0.3
growth on ypd YPD -0.2 +0.0 N.D. -0.1 -0.6
growth on oleic acid YNB Oleic Acid -0.4 -0.7 N.D. -0.3 +0.7
growth on oleic acid YNB Glucose -0.6 -0.3 N.D. -0.4 +0.7
auxotrophy YNB Glucose -0.8 -0.0 N.D. -0.2 +0.5
auxotrophy Dropout Complete -0.9 +0.1 N.D. -0.2 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.9 N.D. -0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.4 N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.5 N.D. -0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 N.D. +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.6 N.D. -0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +1.3 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 N.D. -0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.5 N.D. +0.3 +0.0
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