Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13477 and 13478 are separated by 262 nucleotides13478 and 13479 are separated by 263 nucleotides13479 and 13480 are separated by 765 nucleotides13480 and 13481 are separated by 226 nucleotides mRNA_5109: 13477 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 1,781,885 to 1,783,353 13477 mRNA_5110: 13478 - HMMPfam-Phosphotyrosyl phosphate activator (PTPA) protein-PF03095,SUPERFAMILY--SSF140984, at 1,783,616 to 1,785,108 13478 mRNA_5111: 13479 - K19881 BUD7, BCH1 Chs5-Arf1p-binding protein BUD7/BCH1, at 1,785,372 to 1,788,381 13479 mRNA_5112: 13480 - KOG0872 Sterol C5 desaturase, at 1,789,147 to 1,790,624 13480 mRNA_5113: 13481 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 1,790,851 to 1,792,363 13481
Group Condition mRNA_5109 mRNA_5110 mRNA_5111 mRNA_5112 mRNA_5113
13477 13478 13479 13480 13481
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 -1.0 -0.7 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 -0.3 -0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 +0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.3 +0.2 -0.8
growth on ricinoleic acid YNB Glucose N.D. -0.5 +0.1 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.8 -0.9 -0.2
growth on ypd YPD N.D. -0.1 -0.6 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.3 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 +0.2 +0.3 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.3 +0.7 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.3 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.4 -0.1 -0.2
auxotrophy Dropout Complete N.D. -0.2 +0.4 +0.1 -0.3
growth on oleic acid YNB Glucose N.D. -0.4 +0.7 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 +0.0 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.1 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 -0.3 +0.0 +0.2
auxotrophy YNB Glucose N.D. -0.2 +0.5 +0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.1 +0.1 +0.3
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