Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13479 and 13480 are separated by 765 nucleotides13480 and 13481 are separated by 226 nucleotides13481 and 13482 are separated by 296 nucleotides13482 and 13483 are separated by 233 nucleotides mRNA_5111: 13479 - K19881 BUD7, BCH1 Chs5-Arf1p-binding protein BUD7/BCH1, at 1,785,372 to 1,788,381 13479 mRNA_5112: 13480 - KOG0872 Sterol C5 desaturase, at 1,789,147 to 1,790,624 13480 mRNA_5113: 13481 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 1,790,851 to 1,792,363 13481 mRNA_5114: 13482 - K14820 BRX1, BRIX1 ribosome biogenesis protein BRX1, at 1,792,660 to 1,793,898 13482 mRNA_5115: 13483 - Hypothetical Protein, at 1,794,132 to 1,795,760 13483
Group Condition mRNA_5111 mRNA_5112 mRNA_5113 mRNA_5114 mRNA_5115
13479 13480 13481 13482 13483
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.7 -0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 -0.5 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 -0.1 N.D. -0.1
growth on ypd YPD -0.6 +0.0 +0.0 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.9 -0.2 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 -0.8 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.0 +0.2 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 -0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.1 -0.4 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 -0.1 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 -0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 -0.3 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.7 -0.5 -0.1 N.D. +0.3
auxotrophy Dropout Complete +0.4 +0.1 -0.3 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.0 -0.2 N.D. +0.5
growth on oleic acid YNB Glucose +0.7 -0.0 -0.1 N.D. +0.3
auxotrophy YNB Glucose +0.5 +0.5 -0.4 N.D. +0.5
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