Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13483 and 13484 are separated by 439 nucleotides13484 and 13485 are separated by 292 nucleotides13485 and 13486 are separated by 634 nucleotides13486 and 13487 are separated by 550 nucleotides mRNA_5115: 13483 - Hypothetical Protein, at 1,794,132 to 1,795,760 13483 mRNA_5116: 13484 - K00721 DPM1 dolichol-phosphate mannosyltransferase, at 1,796,200 to 1,797,488 13484 mRNA_5117: 13485 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,797,781 to 1,800,000 13485 mRNA_5118: 13486 - K05349 bglX beta-glucosidase, at 1,800,635 to 1,803,494 13486 mRNA_5119: 13487 - HMMPfam-LysM domain-PF01476,SMART-Lysin motif-SM00257,SUPERFAMILY--SSF54106, at 1,804,045 to 1,805,977 13487
Group Condition mRNA_5115 mRNA_5116 mRNA_5117 mRNA_5118 mRNA_5119
13483 13484 13485 13486 13487
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.2 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.0 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.0 -0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.2 -0.0 -0.3
growth on ypd YPD -0.0 N.D. +0.0 -0.1 +0.0
growth on oleic acid YNB Glucose +0.3 N.D. -0.1 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +0.4 +0.7 -1.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.3 +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.2 +0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.4 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.1 +0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.4 +0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. +0.6 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.0 -0.1 +0.5
auxotrophy YNB Glucose +0.5 N.D. -0.0 +0.2 +0.3
auxotrophy Dropout Complete +0.4 N.D. -0.0 -0.1 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.0 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. +0.1 +0.2 +0.7
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