Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13484 and 13485 are separated by 292 nucleotides13485 and 13486 are separated by 634 nucleotides13486 and 13487 are separated by 550 nucleotides13487 and 13488 are separated by 879 nucleotides mRNA_5116: 13484 - K00721 DPM1 dolichol-phosphate mannosyltransferase, at 1,796,200 to 1,797,488 13484 mRNA_5117: 13485 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,797,781 to 1,800,000 13485 mRNA_5118: 13486 - K05349 bglX beta-glucosidase, at 1,800,635 to 1,803,494 13486 mRNA_5119: 13487 - HMMPfam-LysM domain-PF01476,SMART-Lysin motif-SM00257,SUPERFAMILY--SSF54106, at 1,804,045 to 1,805,977 13487 mRNA_5120: 13488 - K11279 NAP1L1, NRP nucleosome assembly protein 1-like 1, at 1,806,857 to 1,808,752 13488
Group Condition mRNA_5116 mRNA_5117 mRNA_5118 mRNA_5119 mRNA_5120
13484 13485 13486 13487 13488
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.6 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 -0.4 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.3 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.3 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.1 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.0 -0.3 N.D.
growth on ypd YPD N.D. +0.0 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.7 -1.0 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.4 -0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.2 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.1 +0.5 N.D.
auxotrophy YNB Glucose N.D. -0.0 +0.2 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.5 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.0 +0.3 N.D.
auxotrophy Dropout Complete N.D. -0.0 -0.1 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.1 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.6 +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.2 +0.7 N.D.
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