Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13485 and 13486 are separated by 634 nucleotides13486 and 13487 are separated by 550 nucleotides13487 and 13488 are separated by 879 nucleotides13488 and 13489 are separated by 351 nucleotides mRNA_5117: 13485 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,797,781 to 1,800,000 13485 mRNA_5118: 13486 - K05349 bglX beta-glucosidase, at 1,800,635 to 1,803,494 13486 mRNA_5119: 13487 - HMMPfam-LysM domain-PF01476,SMART-Lysin motif-SM00257,SUPERFAMILY--SSF54106, at 1,804,045 to 1,805,977 13487 mRNA_5120: 13488 - K11279 NAP1L1, NRP nucleosome assembly protein 1-like 1, at 1,806,857 to 1,808,752 13488 mRNA_5121: 13489 - K01137 GNS N-acetylglucosamine-6-sulfatase, at 1,809,104 to 1,811,514 13489
Group Condition mRNA_5117 mRNA_5118 mRNA_5119 mRNA_5120 mRNA_5121
13485 13486 13487 13488 13489
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.4 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.6 -0.2 N.D. +0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.0 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.4 -0.2 N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.4 -0.2 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.1 +0.1 -0.1 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.7 -1.0 N.D. -0.1
growth on ypd YPD +0.0 -0.1 +0.0 N.D. +0.2
auxotrophy YNB Glucose -0.0 +0.2 +0.3 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.1 +0.0 N.D. -0.4
auxotrophy Dropout Complete -0.0 -0.1 +0.6 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 +0.2 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.5 -0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 +0.5 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.5 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 +0.7 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.3 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 +0.3 N.D. +0.5
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