Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13489 and 13490 are separated by 442 nucleotides13490 and 13491 are separated by 515 nucleotides13491 and 13492 are separated by 149 nucleotides13492 and 13493 are separated by 177 nucleotides mRNA_5121: 13489 - K01137 GNS N-acetylglucosamine-6-sulfatase, at 1,809,104 to 1,811,514 13489 mRNA_5122: 13490 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,811,957 to 1,814,516 13490 mRNA_5123: 13491 - K14826 FPR3_4 FK506-binding nuclear protein, at 1,815,032 to 1,816,842 13491 mRNA_5124: 13492 - K13248 PHOSPHO2 pyridoxal phosphate phosphatase PHOSPHO2, at 1,816,992 to 1,818,246 13492 mRNA_5125: 13493 - Interpro Protein of unknown function (DUF3431), at 1,818,424 to 1,820,541 13493
Group Condition mRNA_5121 mRNA_5122 mRNA_5123 mRNA_5124 mRNA_5125
13489 13490 13491 13492 13493
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 -0.1 N.D. -2.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.7 N.D. -1.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 +0.0 N.D. -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.2 -0.4 N.D. -0.8
growth on ypd YPD +0.2 +0.1 -0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 -0.5 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.0 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 -0.0 N.D. -0.5
growth on ricinoleic acid YNB Glucose -0.2 +0.3 +0.1 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.0 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 +0.4 +0.4 N.D. -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.3 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.4 +0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 +0.5 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 +0.5 N.D. +0.5
growth on oleic acid YNB Glucose +0.2 +0.2 +0.2 N.D. +0.5
auxotrophy YNB Glucose -0.2 +0.4 +0.4 N.D. +0.6
auxotrophy Dropout Complete -0.3 +0.0 +0.7 N.D. +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.4 +0.9 N.D. +1.0
growth on oleic acid YNB Oleic Acid +0.4 +0.0 +0.6 N.D. +0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.5 +0.6 N.D. +1.4
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