Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13493 and 13494 are separated by 123 nucleotides13494 and 13495 are separated by 287 nucleotides13495 and 13496 are separated by 658 nucleotides13496 and 13497 are separated by 134 nucleotides mRNA_5125: 13493 - Interpro Protein of unknown function (DUF3431), at 1,818,424 to 1,820,541 13493 mRNA_5126: 13494 - Hypothetical Protein, at 1,820,665 to 1,821,231 13494 mRNA_5127: 13495 - K07941 ARF6 ADP-ribosylation factor 6, at 1,821,519 to 1,822,822 13495 mRNA_5128: 13496 - K08342 ATG4 cysteine protease ATG4, at 1,823,481 to 1,827,071 13496 mRNA_5129: 13497 - Hypothetical Protein, at 1,827,206 to 1,828,600 13497
Group Condition mRNA_5125 mRNA_5126 mRNA_5127 mRNA_5128 mRNA_5129
13493 13494 13495 13496 13497
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 -0.4 N.D. -0.8 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.8 N.D. -2.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -0.9 N.D. +0.3 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 N.D. -1.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.0 N.D. -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 N.D. -1.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.1 N.D. +0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 +0.3 N.D. -0.7 +1.4
growth on ypd YPD -0.1 +0.4 N.D. +0.1 -0.2
growth on oleic acid YNB Glucose +0.5 +0.2 N.D. +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.6 N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 N.D. +0.2 +0.8
growth on ricinoleic acid YNB Glucose +0.3 +1.3 N.D. -0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.3 N.D. -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.9 +0.1 N.D. -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 +1.1 N.D. -0.1 -0.5
auxotrophy Dropout Complete +0.8 +0.9 N.D. -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 +1.2 N.D. -0.3 -0.7
auxotrophy YNB Glucose +0.6 +0.8 N.D. -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.4 +1.5 N.D. -0.2 -0.7
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