Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13495 and 13496 are separated by 658 nucleotides13496 and 13497 are separated by 134 nucleotides13497 and 13498 are separated by 662 nucleotides13498 and 13499 are separated by 166 nucleotides mRNA_5127: 13495 - K07941 ARF6 ADP-ribosylation factor 6, at 1,821,519 to 1,822,822 13495 mRNA_5128: 13496 - K08342 ATG4 cysteine protease ATG4, at 1,823,481 to 1,827,071 13496 mRNA_5129: 13497 - Hypothetical Protein, at 1,827,206 to 1,828,600 13497 mRNA_5130: 13498 - Hypothetical Protein, at 1,829,263 to 1,829,910 13498 mRNA_5131: 13499 - Hypothetical Protein, at 1,830,077 to 1,833,638 13499
Group Condition mRNA_5127 mRNA_5128 mRNA_5129 mRNA_5130 mRNA_5131
13495 13496 13497 13498 13499
facs on lipid accumulation Sorted High BODIPY Gate N.D. -2.0 -0.1 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.5 +0.2 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.5 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.7 N.D. +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.6 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.7 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.4 N.D. -0.1
auxotrophy Dropout Complete N.D. -0.3 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.3 +0.7 N.D. +0.1
growth on oleic acid YNB Glucose N.D. +0.1 -0.4 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.0 N.D. -0.0
growth on ypd YPD N.D. +0.1 -0.2 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 +0.7 N.D. +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.0 N.D. +0.1
auxotrophy YNB Glucose N.D. -0.3 +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.0 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 +1.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.6 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.8 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.3 N.D. +0.5
remove
mRNA_5127
plot
remove
mRNA_5128
plot
remove
mRNA_5129
remove
mRNA_5130
plot
remove
mRNA_5131
plot