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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13495 and 13496 are separated by 658 nucleotides
13496 and 13497 are separated by 134 nucleotides
13497 and 13498 are separated by 662 nucleotides
13498 and 13499 are separated by 166 nucleotides
mRNA_5127: 13495 - K07941 ARF6 ADP-ribosylation factor 6, at 1,821,519 to 1,822,822
13495
mRNA_5128: 13496 - K08342 ATG4 cysteine protease ATG4, at 1,823,481 to 1,827,071
13496
mRNA_5129: 13497 - Hypothetical Protein, at 1,827,206 to 1,828,600
13497
mRNA_5130: 13498 - Hypothetical Protein, at 1,829,263 to 1,829,910
13498
mRNA_5131: 13499 - Hypothetical Protein, at 1,830,077 to 1,833,638
13499
Group
Condition
mRNA
_5127
mRNA
_5128
mRNA
_5129
mRNA
_5130
mRNA
_5131
13495
13496
13497
13498
13499
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-2.0
-0.1
N.D.
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.5
+0.2
N.D.
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.5
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
-0.7
N.D.
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
-0.6
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.2
-0.7
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.4
N.D.
-0.1
auxotrophy
Dropout Complete
N.D.
-0.3
-0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-1.3
+0.7
N.D.
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.4
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.0
N.D.
-0.0
growth on ypd
YPD
N.D.
+0.1
-0.2
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.8
+0.7
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose
N.D.
-0.3
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
-0.0
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.7
+1.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.6
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
+0.8
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
+0.3
N.D.
+0.5
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