Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13500 and 13501 are separated by 118 nucleotides13501 and 13502 are separated by 471 nucleotides13502 and 13503 are separated by 485 nucleotides13503 and 13504 are separated by 249 nucleotides mRNA_5132: 13500 - K03025 RPC6, POLR3F DNA-directed RNA polymerase III subunit RPC6, at 1,833,985 to 1,836,173 13500 mRNA_5133: 13501 - Interpro Proteasome assembly chaperone 4, at 1,836,292 to 1,836,837 13501 mRNA_5134: 13502 - Hypothetical Protein, at 1,837,309 to 1,837,612 13502 mRNA_5135: 13503 - KOG2112 Lysophospholipase, at 1,838,098 to 1,839,566 13503 mRNA_5136: 13504 - BLAST MYB DNA-binding domain protein [Macrophomina phaseoli..., at 1,839,816 to 1,840,478 13504
Group Condition mRNA_5132 mRNA_5133 mRNA_5134 mRNA_5135 mRNA_5136
13500 13501 13502 13503 13504
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 -0.6 -0.6 +0.1 -1.7
auxotrophy YNB Glucose 75mM Arginine -1.8 +0.5 +0.4 +0.5 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 -0.4 +0.0 +0.2
growth on ypd YPD -0.1 +0.6 -0.2 -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.5 +0.2 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.6 +0.3 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.3 +0.0 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.3 +0.0 -0.1 -0.2
auxotrophy Dropout Complete -0.6 +0.2 +0.4 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.2 -0.2 +0.4 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.9 -0.4 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.0 +0.3 -0.0
growth on oleic acid YNB Glucose -0.2 +0.3 +0.4 +0.3 -0.2
auxotrophy YNB Glucose +0.1 +0.0 +0.2 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 +0.2 +0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.0 +1.0 +0.5 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.2 -0.0 +0.6 +0.3 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.4 +1.1 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.4 -0.1 +0.5 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.6 +0.5 +0.5 +1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 +0.1 +0.4 +0.6 +0.9
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