Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13500 and 13501 are separated by 118 nucleotides
13501 and 13502 are separated by 471 nucleotides
13502 and 13503 are separated by 485 nucleotides
13503 and 13504 are separated by 249 nucleotides
mRNA_5132: 13500 - K03025 RPC6, POLR3F DNA-directed RNA polymerase III subunit RPC6, at 1,833,985 to 1,836,173
13500
mRNA_5133: 13501 - Interpro Proteasome assembly chaperone 4, at 1,836,292 to 1,836,837
13501
mRNA_5134: 13502 - Hypothetical Protein, at 1,837,309 to 1,837,612
13502
mRNA_5135: 13503 - KOG2112 Lysophospholipase, at 1,838,098 to 1,839,566
13503
mRNA_5136: 13504 - BLAST MYB DNA-binding domain protein [Macrophomina phaseoli..., at 1,839,816 to 1,840,478
13504
Group
Condition
mRNA
_5132
mRNA
_5133
mRNA
_5134
mRNA
_5135
mRNA
_5136
13500
13501
13502
13503
13504
ypd buoyancy
40 hrs No Buoyancy Separation
-1.5
-0.6
-0.6
+0.1
-1.7
auxotrophy
YNB Glucose 75mM Arginine
-1.8
+0.5
+0.4
+0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
-0.4
+0.0
+0.2
growth on ypd
YPD
-0.1
+0.6
-0.2
-0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.5
+0.2
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.6
+0.3
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.3
+0.0
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.3
+0.0
-0.1
-0.2
auxotrophy
Dropout Complete
-0.6
+0.2
+0.4
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.2
-0.2
+0.4
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.9
-0.4
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
-0.0
+0.3
-0.0
growth on oleic acid
YNB Glucose
-0.2
+0.3
+0.4
+0.3
-0.2
auxotrophy
YNB Glucose
+0.1
+0.0
+0.2
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.4
+0.2
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+1.0
+0.5
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
+0.6
+0.3
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
+0.4
+1.1
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.4
-0.1
+0.5
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.6
+0.5
+0.5
+1.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
+0.1
+0.4
+0.6
+0.9
remove
mRNA_5132
plot
remove
mRNA_5133
plot
remove
mRNA_5134
remove
mRNA_5135
plot
remove
mRNA_5136
plot