Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13502 and 13503 are separated by 485 nucleotides13503 and 13504 are separated by 249 nucleotides13504 and 13505 are separated by 356 nucleotides13505 and 13506 are separated by 148 nucleotides mRNA_5134: 13502 - Hypothetical Protein, at 1,837,309 to 1,837,612 13502 mRNA_5135: 13503 - KOG2112 Lysophospholipase, at 1,838,098 to 1,839,566 13503 mRNA_5136: 13504 - BLAST MYB DNA-binding domain protein [Macrophomina phaseoli..., at 1,839,816 to 1,840,478 13504 mRNA_5137: 13505 - K13342 PEX5, PXR1 peroxin-5, at 1,840,835 to 1,843,889 13505 mRNA_5138: 13506 - K20359 RABAC1, PRAF1 PRA1 family protein 1, at 1,844,038 to 1,845,081 13506
Group Condition mRNA_5134 mRNA_5135 mRNA_5136 mRNA_5137 mRNA_5138
13502 13503 13504 13505 13506
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.1 -1.7 -0.5 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 -0.2 -1.4 -0.3
growth on oleic acid YNB Oleic Acid +0.5 -0.1 -0.5 -2.2 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 -0.3 -0.8 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.3 -0.4 -0.3
growth on ypd YPD -0.2 -0.0 -0.6 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.4 -0.7 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 -0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.1 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.0 +0.2 +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 +0.2 +0.5 -1.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 -0.0 -0.2 +0.6
auxotrophy YNB Glucose +0.2 +0.3 -0.0 -0.1 +0.4
growth on oleic acid YNB Glucose +0.4 +0.3 -0.2 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -0.0 +0.3 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.5 -0.0 -0.1 +0.4
auxotrophy Dropout Complete +0.4 +0.2 -0.0 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 +0.8 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.6 +0.9 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.6 +0.3 +0.8 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.5 +1.4 +0.3 -0.3
remove
mRNA_5134
plot
remove
mRNA_5135
plot
remove
mRNA_5136
remove
mRNA_5137
plot
remove
mRNA_5138
plot