Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13503 and 13504 are separated by 249 nucleotides13504 and 13505 are separated by 356 nucleotides13505 and 13506 are separated by 148 nucleotides13506 and 13507 are separated by 189 nucleotides mRNA_5135: 13503 - KOG2112 Lysophospholipase, at 1,838,098 to 1,839,566 13503 mRNA_5136: 13504 - BLAST MYB DNA-binding domain protein [Macrophomina phaseoli..., at 1,839,816 to 1,840,478 13504 mRNA_5137: 13505 - K13342 PEX5, PXR1 peroxin-5, at 1,840,835 to 1,843,889 13505 mRNA_5138: 13506 - K20359 RABAC1, PRAF1 PRA1 family protein 1, at 1,844,038 to 1,845,081 13506 mRNA_5139: 13507 - KOG1944 Peroxisomal membrane protein MPV17 and related proteins, at 1,845,271 to 1,846,302 13507
Group Condition mRNA_5135 mRNA_5136 mRNA_5137 mRNA_5138 mRNA_5139
13503 13504 13505 13506 13507
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.7 -0.5 -0.6 +0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.5 -2.2 +0.6 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -1.4 -0.3 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.4 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 -0.8 +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 -0.2 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 -1.4 +0.1 +0.3
growth on ypd YPD -0.0 -0.6 -0.2 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 +0.2 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.1 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 -0.2 +0.6 -0.2
growth on oleic acid YNB Glucose +0.3 -0.2 -0.1 +0.5 +0.1
auxotrophy YNB Glucose +0.3 -0.0 -0.1 +0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.0 -0.1 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 +0.2 +0.4 +0.1
auxotrophy Dropout Complete +0.2 -0.0 +0.3 +0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.9 -0.1 -0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.8 -0.1 +0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.3 +0.5 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.8 +0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +1.4 +0.3 -0.3 +0.1
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