Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13503 and 13504 are separated by 249 nucleotides
13504 and 13505 are separated by 356 nucleotides
13505 and 13506 are separated by 148 nucleotides
13506 and 13507 are separated by 189 nucleotides
mRNA_5135: 13503 - KOG2112 Lysophospholipase, at 1,838,098 to 1,839,566
13503
mRNA_5136: 13504 - BLAST MYB DNA-binding domain protein [Macrophomina phaseoli..., at 1,839,816 to 1,840,478
13504
mRNA_5137: 13505 - K13342 PEX5, PXR1 peroxin-5, at 1,840,835 to 1,843,889
13505
mRNA_5138: 13506 - K20359 RABAC1, PRAF1 PRA1 family protein 1, at 1,844,038 to 1,845,081
13506
mRNA_5139: 13507 - KOG1944 Peroxisomal membrane protein MPV17 and related proteins, at 1,845,271 to 1,846,302
13507
Group
Condition
mRNA
_5135
mRNA
_5136
mRNA
_5137
mRNA
_5138
mRNA
_5139
13503
13504
13505
13506
13507
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-1.7
-0.5
-0.6
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.5
-2.2
+0.6
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-1.4
-0.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
-0.4
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.3
-0.8
+0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.7
-0.2
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
-1.4
+0.1
+0.3
growth on ypd
YPD
-0.0
-0.6
-0.2
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
+0.2
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
+0.1
+0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.0
-0.2
+0.6
-0.2
growth on oleic acid
YNB Glucose
+0.3
-0.2
-0.1
+0.5
+0.1
auxotrophy
YNB Glucose
+0.3
-0.0
-0.1
+0.4
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.0
-0.1
+0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
+0.2
+0.4
+0.1
auxotrophy
Dropout Complete
+0.2
-0.0
+0.3
+0.5
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.9
-0.1
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
+0.3
+0.8
-0.1
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
+0.3
+0.5
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.8
+0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+1.4
+0.3
-0.3
+0.1
remove
mRNA_5135
plot
remove
mRNA_5136
plot
remove
mRNA_5137
remove
mRNA_5138
plot
remove
mRNA_5139
plot