Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13506 and 13507 are separated by 189 nucleotides13507 and 13508 are separated by 282 nucleotides mRNA_5138: 13506 - K20359 RABAC1, PRAF1 PRA1 family protein 1, at 1,844,038 to 1,845,081 13506 mRNA_5139: 13507 - KOG1944 Peroxisomal membrane protein MPV17 and related proteins, at 1,845,271 to 1,846,302 13507 mRNA_5140: 13508 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 1,846,585 to 1,847,965 13508
Group Condition mRNA_5138 mRNA_5139 mRNA_5140
13506 13507 13508
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.2 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 +0.4
growth on ypd YPD +0.1 +0.6 -0.0
auxotrophy Dropout Complete +0.5 +0.3 -0.1
growth on oleic acid YNB Glucose +0.5 +0.1 +0.1
auxotrophy YNB Glucose +0.4 +0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.6 -0.1
growth on oleic acid YNB Oleic Acid +0.6 +0.3 +0.2
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