Fitness for 3 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13509 and 13510 are separated by 952 nucleotides13510 and 13511 are separated by 1116 nucleotides mRNA_5141: 13509 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1 to 752 13509 mRNA_5142: 13510 - K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10, at 1,705 to 3,095 13510 mRNA_5143: 13511 - K12763 SOK2 protein SOK2, at 4,212 to 7,292 13511
Group Condition mRNA_5141 mRNA_5142 mRNA_5143
13509 13510 13511
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.1
auxotrophy YNB Glucose -0.3 -0.2 +0.1
auxotrophy Dropout Complete -0.5 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 -0.3 -0.3
growth on ypd YPD +0.4 +0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.7 -0.2 +0.1
growth on oleic acid YNB Glucose +0.5 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +1.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.6 -0.0
growth on oleic acid YNB Oleic Acid +1.1 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.7 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +1.0 +0.3
remove
mRNA_5141		 remove
mRNA_5142
plot		 remove
mRNA_5143
plot