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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13511 and 13512 are separated by 854 nucleotides
13512 and 13513 are separated by 449 nucleotides
13513 and 13514 are separated by 1882 nucleotides
13514 and 13515 are separated by 915 nucleotides
mRNA_5143: 13511 - K12763 SOK2 protein SOK2, at 4,212 to 7,292
13511
mRNA_5144: 13512 - BLAST putative mit domain-containing protein [Erysiphe neca..., at 8,147 to 8,373
13512
mRNA_5145: 13513 - Hypothetical Protein, at 8,823 to 11,115
13513
mRNA_5146: 13514 - Hypothetical Protein, at 12,998 to 14,215
13514
mRNA_5147: 13515 - Hypothetical Protein, at 15,131 to 16,351
13515
Group
Condition
mRNA
_5143
mRNA
_5144
mRNA
_5145
mRNA
_5146
mRNA
_5147
13511
13512
13513
13514
13515
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.9
-0.8
-0.4
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.7
-0.2
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
-0.0
+0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
+0.2
-0.2
+0.2
growth on ypd
YPD
-0.1
-0.3
+0.1
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+1.1
-0.4
+0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.5
+0.5
+0.2
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.4
+0.3
+0.1
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
+0.9
+0.5
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+1.6
+0.5
+0.1
+0.0
growth on oleic acid
YNB Glucose
+0.1
+0.9
+0.8
+0.4
+0.4
auxotrophy
YNB Glucose
+0.1
+1.5
+0.5
+0.3
+0.4
auxotrophy
Dropout Complete
+0.1
+1.2
+0.6
+0.6
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+1.5
+0.5
+0.7
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+2.0
+0.4
+0.4
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+2.5
+0.4
+0.4
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+2.0
+1.3
+0.5
+0.4
growth on oleic acid
YNB Oleic Acid
+0.0
+1.8
+1.2
+0.4
+1.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+1.7
+1.4
+0.4
+0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+2.6
+0.9
+0.2
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+2.7
+1.8
+0.6
+0.6
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