Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13523 and 13524 are separated by 812 nucleotides13524 and 13525 are separated by 420 nucleotides13525 and 13526 are separated by 965 nucleotides13526 and 13527 are separated by 822 nucleotides mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30,718 to 32,151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32,964 to 35,897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36,318 to 38,711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39,677 to 40,567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41,390 to 42,543 13527
Group Condition mRNA_5155 mRNA_5156 mRNA_5157 mRNA_5158 mRNA_5159
13523 13524 13525 13526 13527
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.5 -0.5 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 +0.1 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 +0.2 N.D. -0.1
auxotrophy Dropout Complete +0.4 +0.0 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 +0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 +0.6 N.D. -0.2
growth on oleic acid YNB Glucose +0.2 +0.3 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.2 -0.2 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.2 +0.4 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.0 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.2 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.0 -0.1 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.8 +0.3 +0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.2 -0.2 N.D. +0.3
growth on ypd YPD +0.2 -0.0 +0.1 N.D. +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 -0.1 +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.8 -0.0 +0.3 N.D. +0.0
auxotrophy YNB Glucose +0.7 +0.1 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.4 -0.1 +0.3 N.D. +0.1
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