Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13524 and 13525 are separated by 420 nucleotides13525 and 13526 are separated by 965 nucleotides13526 and 13527 are separated by 822 nucleotides13527 and 13528 are separated by 545 nucleotides mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32,964 to 35,897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36,318 to 38,711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39,677 to 40,567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41,390 to 42,543 13527 mRNA_5160: 13528 - Hypothetical Protein, at 43,089 to 43,847 13528
Group Condition mRNA_5156 mRNA_5157 mRNA_5158 mRNA_5159 mRNA_5160
13524 13525 13526 13527 13528
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 N.D. +0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.5 N.D. -0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. -0.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 N.D. -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 N.D. +0.3 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 N.D. -0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.3 N.D. -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 N.D. +0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 N.D. +0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. +0.1 -0.1
auxotrophy Dropout Complete +0.0 -0.0 N.D. -0.1 +0.3
growth on oleic acid YNB Glucose +0.3 +0.2 N.D. -0.1 -0.0
auxotrophy YNB Glucose +0.1 +0.2 N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 N.D. +0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 N.D. +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.6 N.D. -0.2 +0.1
growth on ypd YPD -0.0 +0.1 N.D. +0.7 +0.7
remove
mRNA_5156
plot
remove
mRNA_5157
plot
remove
mRNA_5158
remove
mRNA_5159
plot
remove
mRNA_5160
plot