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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13528 and 13529 are separated by 1069 nucleotides
13529 and 13530 are separated by 795 nucleotides
13530 and 13531 are separated by 1013 nucleotides
13531 and 13532 are separated by 426 nucleotides
mRNA_5160: 13528 - Hypothetical Protein, at 43,089 to 43,847
13528
mRNA_5161: 13529 - Hypothetical Protein, at 44,917 to 45,595
13529
mRNA_5162: 13530 - Hypothetical Protein, at 46,391 to 47,176
13530
mRNA_5163: 13531 - Hypothetical Protein, at 48,190 to 49,744
13531
mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50,171 to 51,821
13532
Group
Condition
mRNA
_5160
mRNA
_5161
mRNA
_5162
mRNA
_5163
mRNA
_5164
13528
13529
13530
13531
13532
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-2.3
+0.8
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
+0.2
+0.0
-0.8
auxotrophy
Dropout Complete
+0.3
-0.1
-0.6
+0.3
-0.6
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.2
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
+0.2
+0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.2
-0.1
+0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
+0.2
+0.4
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.1
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
-0.3
+0.5
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.2
-0.2
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
-0.3
+0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
+0.3
+0.1
-0.5
auxotrophy
YNB Glucose
-0.1
+0.6
-0.5
+0.3
-0.5
growth on oleic acid
YNB Glucose
-0.0
-0.4
-0.3
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.7
-0.1
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.2
-0.2
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.4
+0.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.4
-0.4
+0.4
-0.5
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
+0.1
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
+0.2
+0.1
+0.2
growth on ypd
YPD
+0.7
+0.5
+0.1
+0.1
+0.4
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