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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13530 and 13531 are separated by 1013 nucleotides
13531 and 13532 are separated by 426 nucleotides
13532 and 13533 are separated by 504 nucleotides
13533 and 13534 are separated by 648 nucleotides
mRNA_5162: 13530 - Hypothetical Protein, at 46,391 to 47,176
13530
mRNA_5163: 13531 - Hypothetical Protein, at 48,190 to 49,744
13531
mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50,171 to 51,821
13532
mRNA_5165: 13533 - Hypothetical Protein, at 52,326 to 52,658
13533
mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53,307 to 58,220
13534
Group
Condition
mRNA
_5162
mRNA
_5163
mRNA
_5164
mRNA
_5165
mRNA
_5166
13530
13531
13532
13533
13534
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.4
-1.3
+0.1
+0.0
auxotrophy
Dropout Complete
-0.6
+0.3
-0.6
+0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.1
-0.5
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
-0.8
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.4
-0.5
-0.1
+0.4
auxotrophy
YNB Glucose
-0.5
+0.3
-0.5
-0.1
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
-0.5
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
+0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.5
+0.0
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.0
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.3
-0.3
-0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.2
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
-0.1
-0.1
-0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.4
+0.3
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.5
-0.5
+0.1
+0.8
growth on oleic acid
YNB Glucose
-0.3
+0.2
+0.3
-0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
+0.3
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
+0.2
-0.0
+0.1
growth on ypd
YPD
+0.1
+0.1
+0.4
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.4
-0.0
+0.3
+0.5
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