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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13533 and 13534 are separated by 648 nucleotides
13534 and 13535 are separated by 561 nucleotides
13535 and 13536 are separated by 1463 nucleotides
13536 and 13537 are separated by 234 nucleotides
mRNA_5165: 13533 - Hypothetical Protein, at 52,326 to 52,658
13533
mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53,307 to 58,220
13534
mRNA_5167: 13535 - Hypothetical Protein, at 58,782 to 59,470
13535
mRNA_5168: 13536 - SUPERFAMILY--SSF46955, at 60,934 to 62,324
13536
mRNA_5169: 13537 - Hypothetical Protein, at 62,559 to 64,260
13537
Group
Condition
mRNA
_5165
mRNA
_5166
mRNA
_5167
mRNA
_5168
mRNA
_5169
13533
13534
13535
13536
13537
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
-1.7
+0.0
-1.2
growth on oleic acid
YNB Oleic Acid
-0.0
+0.1
-1.4
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
-0.9
+0.6
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.0
-0.5
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
+0.1
-0.2
-0.0
growth on ypd
YPD
+0.0
+0.0
-0.3
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
-0.0
+0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.1
+0.4
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
+0.1
-0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.0
+0.0
+0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.1
+0.6
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.1
+0.3
-0.2
growth on oleic acid
YNB Glucose
-0.0
+0.3
+0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.8
-0.4
+0.3
-0.2
auxotrophy
Dropout Complete
+0.0
+0.4
+0.5
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.2
+0.4
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.6
-0.3
+0.7
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.5
+0.4
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.4
+0.5
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.5
-0.0
+0.6
+0.0
auxotrophy
YNB Glucose
-0.1
+0.6
+1.0
+0.5
-0.1
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