Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13539 and 13540 are separated by 1528 nucleotides13540 and 13541 are separated by 1645 nucleotides13541 and 13542 are separated by 1180 nucleotides13542 and 13543 are separated by 292 nucleotides mRNA_5171: 13539 - KOG2262 Sexual differentiation process protein ISP4, at 65,762 to 68,577 13539 mRNA_5172: 13540 - BLAST similar to An11g07040 [Aspergillus kawachii IFO 4308], at 70,106 to 71,183 13540 mRNA_5173: 13541 - KOG1189 Global transcriptional regulator, cell division control protein, at 72,829 to 76,773 13541 mRNA_5174: 13542 - Hypothetical Protein, at 77,954 to 78,191 13542 mRNA_5175: 13543 - K08341 GABARAP, ATG8, LC3 GABA(A) receptor-associated protein, at 78,484 to 79,264 13543
Group Condition mRNA_5171 mRNA_5172 mRNA_5173 mRNA_5174 mRNA_5175
13539 13540 13541 13542 13543
facs on lipid accumulation Sorted High BODIPY Gate -1.3 +0.3 -1.6 -0.1 -4.2
facs on lipid accumulation Sorted No BODIPY Gate -2.5 +0.1 -1.0 +0.2 -2.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.1 +0.4 -0.1 -2.3
growth on ricinoleic acid YNB Ricinoleic Acid -3.1 +0.1 -0.3 +0.7 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.0 -0.4 -0.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -3.6 +0.1 +1.5 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 +0.0 -0.1 +0.8 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.1 +0.6 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy -1.8 -0.1 +0.1 +0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.0 -1.1 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 -1.2 +0.6 +0.3
growth on oleic acid YNB Oleic Acid -1.5 +0.0 +0.6 +0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.7 +0.1 -0.4 +0.6 -0.1
auxotrophy YNB Glucose -0.3 +0.0 -1.2 +0.8 +0.3
auxotrophy Dropout Complete -0.4 +0.0 -0.4 +0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.0 -0.3 +1.0 -0.0
growth on oleic acid YNB Glucose -0.6 +0.1 +0.3 +0.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 -0.5 +0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 +0.6 -0.9 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 +0.7 +0.2 +0.3
growth on ypd YPD +0.7 -0.1 +1.1 +1.1 +0.2
remove
mRNA_5171
plot
remove
mRNA_5172
plot
remove
mRNA_5173
remove
mRNA_5174
plot
remove
mRNA_5175
plot