Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13541 and 13542 are separated by 1180 nucleotides
13542 and 13543 are separated by 292 nucleotides
13543 and 13544 are separated by 902 nucleotides
13544 and 13545 are separated by 325 nucleotides
mRNA_5173: 13541 - KOG1189 Global transcriptional regulator, cell division control protein, at 72,829 to 76,773
13541
mRNA_5174: 13542 - Hypothetical Protein, at 77,954 to 78,191
13542
mRNA_5175: 13543 - K08341 GABARAP, ATG8, LC3 GABA(A) receptor-associated protein, at 78,484 to 79,264
13543
mRNA_5176: 13544 - Hypothetical Protein, at 80,167 to 80,892
13544
mRNA_5177: 13545 - K07874 RAB1A Ras-related protein Rab-1A, at 81,218 to 82,188
13545
Group
Condition
mRNA
_5173
mRNA
_5174
mRNA
_5175
mRNA
_5176
mRNA
_5177
13541
13542
13543
13544
13545
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
-0.1
-4.2
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
+0.2
-2.0
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
-2.3
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.3
-0.7
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-1.1
-0.0
+0.1
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-1.2
+0.6
+0.3
-0.1
N.D.
auxotrophy
YNB Glucose
-1.2
+0.8
+0.3
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.1
-0.8
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.4
+0.6
-0.1
-0.0
N.D.
auxotrophy
Dropout Complete
-0.4
+0.1
+0.4
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.6
-0.1
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.9
+0.8
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.7
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.8
-0.3
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.6
+0.4
-0.2
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.7
+0.1
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+1.0
-0.0
+0.0
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.7
-0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.2
+0.3
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.5
+0.1
+0.0
+0.6
N.D.
growth on ypd
YPD
+1.1
+1.1
+0.2
-0.0
N.D.
remove
mRNA_5173
plot
remove
mRNA_5174
plot
remove
mRNA_5175
remove
mRNA_5176
plot
remove
mRNA_5177
plot