Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13544 and 13545 are separated by 325 nucleotides13545 and 13546 are separated by 995 nucleotides13546 and 13547 are separated by 514 nucleotides13547 and 13548 are separated by 529 nucleotides mRNA_5176: 13544 - Hypothetical Protein, at 80,167 to 80,892 13544 mRNA_5177: 13545 - K07874 RAB1A Ras-related protein Rab-1A, at 81,218 to 82,188 13545 mRNA_5178: 13546 - BLAST chromatin remodeling factor subunit [Kalmanozyma ..., at 83,184 to 83,780 13546 mRNA_5179: 13547 - Hypothetical Protein, at 84,295 to 87,162 13547 mRNA_5180: 13548 - Hypothetical Protein, at 87,692 to 90,433 13548
Group Condition mRNA_5176 mRNA_5177 mRNA_5178 mRNA_5179 mRNA_5180
13544 13545 13546 13547 13548
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.4 -0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.1 -0.2 -0.3
growth on oleic acid YNB Glucose -0.0 N.D. -0.4 -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.2 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.2 -0.2 +0.5
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.1 -0.0 +0.1
growth on ypd YPD -0.0 N.D. +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.4 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. +0.0 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.5 +0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.0 -0.1 +0.1
auxotrophy YNB Glucose -0.2 N.D. -0.3 -0.0 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.0 -0.2 +0.3
auxotrophy Dropout Complete +0.1 N.D. -0.2 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.3 +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.0 +0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.2 +0.5 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. +0.1 +0.0 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.1 +0.0 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. -0.0 +0.3 +0.4
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