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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13545 and 13546 are separated by 995 nucleotides
13546 and 13547 are separated by 514 nucleotides
13547 and 13548 are separated by 529 nucleotides
13548 and 13549 are separated by 310 nucleotides
mRNA_5177: 13545 - K07874 RAB1A Ras-related protein Rab-1A, at 81,218 to 82,188
13545
mRNA_5178: 13546 - BLAST chromatin remodeling factor subunit [Kalmanozyma ..., at 83,184 to 83,780
13546
mRNA_5179: 13547 - Hypothetical Protein, at 84,295 to 87,162
13547
mRNA_5180: 13548 - Hypothetical Protein, at 87,692 to 90,433
13548
mRNA_5181: 13549 - Hypothetical Protein, at 90,744 to 91,309
13549
Group
Condition
mRNA
_5177
mRNA
_5178
mRNA
_5179
mRNA
_5180
mRNA
_5181
13545
13546
13547
13548
13549
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.3
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.2
-0.3
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.4
-0.0
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
-0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
+0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.0
+0.1
N.D.
growth on ypd
YPD
N.D.
+0.2
-0.4
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.5
+0.3
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.2
-0.2
+0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
-0.1
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.2
+0.3
N.D.
auxotrophy
Dropout Complete
N.D.
-0.2
-0.2
+0.6
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+0.2
+0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
+0.5
-0.3
N.D.
auxotrophy
YNB Glucose
N.D.
-0.3
-0.0
+0.7
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.0
+0.0
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.0
+0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.3
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.0
+0.9
N.D.
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