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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13546 and 13547 are separated by 514 nucleotides
13547 and 13548 are separated by 529 nucleotides
13548 and 13549 are separated by 310 nucleotides
13549 and 13550 are separated by 605 nucleotides
mRNA_5178: 13546 - BLAST chromatin remodeling factor subunit [Kalmanozyma ..., at 83,184 to 83,780
13546
mRNA_5179: 13547 - Hypothetical Protein, at 84,295 to 87,162
13547
mRNA_5180: 13548 - Hypothetical Protein, at 87,692 to 90,433
13548
mRNA_5181: 13549 - Hypothetical Protein, at 90,744 to 91,309
13549
mRNA_5182: 13550 - Hypothetical Protein, at 91,915 to 92,880
13550
Group
Condition
mRNA
_5178
mRNA
_5179
mRNA
_5180
mRNA
_5181
mRNA
_5182
13546
13547
13548
13549
13550
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
-0.2
N.D.
-1.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.3
+0.4
N.D.
-1.9
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.5
-0.3
N.D.
-1.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.1
N.D.
-0.8
growth on oleic acid
YNB Oleic Acid
-0.4
-0.3
-0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.1
-0.0
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.1
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.3
+0.3
N.D.
-0.6
growth on oleic acid
YNB Glucose
-0.4
-0.0
-0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
+0.5
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.2
+0.4
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
+0.3
N.D.
+0.2
auxotrophy
Dropout Complete
-0.2
-0.2
+0.6
N.D.
+0.1
auxotrophy
YNB Glucose
-0.3
-0.0
+0.7
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.3
N.D.
+0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.1
+0.2
N.D.
+0.9
growth on ypd
YPD
+0.2
-0.4
+0.1
N.D.
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
+0.5
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
+0.1
N.D.
+0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
+0.9
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.0
+0.4
N.D.
+0.6
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