Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13556 and 13557 are separated by 615 nucleotides13557 and 13558 are separated by 385 nucleotides13558 and 13559 are separated by 549 nucleotides13559 and 13560 are separated by 121 nucleotides mRNA_5188: 13556 - HMMPfam-Protein of unknown function (DUF3421)-PF11901,SMART-Repeats found in Drosophila proteins.-SM00696, at 107,668 to 108,466 13556 mRNA_5189: 13557 - K14290 XPO1, CRM1 exportin-1, at 109,082 to 113,752 13557 mRNA_5190: 13558 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 114,138 to 116,063 13558 mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116,613 to 117,622 13559 mRNA_5192: 13560 - KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family), at 117,744 to 118,664 13560
Group Condition mRNA_5188 mRNA_5189 mRNA_5190 mRNA_5191 mRNA_5192
13556 13557 13558 13559 13560
growth on oleic acid YNB Oleic Acid -0.3 N.D. N.D. +0.1 -1.5
auxotrophy Dropout Complete -0.7 N.D. N.D. -0.2 -0.7
growth on oleic acid YNB Glucose -0.0 N.D. N.D. +0.0 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. -0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. -0.1 -0.5
auxotrophy YNB Glucose -0.3 N.D. N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. -0.0 -0.2
growth on ypd YPD -0.1 N.D. N.D. -0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. N.D. +0.4 -0.9
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. N.D. -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. N.D. -0.1 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.4 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.3 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. N.D. +0.2 +1.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. N.D. -0.2 +1.5
remove
mRNA_5188
plot		 remove
mRNA_5189
plot		 remove
mRNA_5190		 remove
mRNA_5191
plot		 remove
mRNA_5192
plot