Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13562 and 13563 are separated by 697 nucleotides13563 and 13564 are separated by 434 nucleotides13564 and 13565 are separated by 117 nucleotides13565 and 13566 are separated by 681 nucleotides mRNA_5194: 13562 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 122,774 to 124,635 13562 mRNA_5195: 13563 - KOG0814 Glyoxylase, at 125,333 to 126,456 13563 mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126,891 to 128,997 13564 mRNA_5197: 13565 - Hypothetical Protein, at 129,115 to 130,730 13565 mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131,412 to 133,498 13566
Group Condition mRNA_5194 mRNA_5195 mRNA_5196 mRNA_5197 mRNA_5198
13562 13563 13564 13565 13566
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -3.8 -0.2 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -1.7 -0.2 +0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -2.4 +0.1 +0.2 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 -0.6 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.6 -0.0 +0.1 +0.3
auxotrophy Dropout Complete +0.5 -0.0 -0.2 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.0 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.5 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.2 +0.2 +0.2
auxotrophy YNB Glucose +0.5 +0.1 -0.4 -0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.3 +0.1 -0.1 -0.1 +0.1
growth on ypd YPD +0.3 +0.4 +0.1 -0.3 +0.0
growth on oleic acid YNB Glucose +0.6 +0.3 -0.2 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.1 -0.2 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +0.2 -0.5 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.3 -0.5 -0.0 +0.4
growth on ricinoleic acid YNB Glucose +0.5 +0.4 -0.2 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.5 -0.1 +0.2 +0.0
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