Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13563 and 13564 are separated by 434 nucleotides
13564 and 13565 are separated by 117 nucleotides
13565 and 13566 are separated by 681 nucleotides
13566 and 13567 are separated by 108 nucleotides
mRNA_5195: 13563 - KOG0814 Glyoxylase, at 125,333 to 126,456
13563
mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126,891 to 128,997
13564
mRNA_5197: 13565 - Hypothetical Protein, at 129,115 to 130,730
13565
mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131,412 to 133,498
13566
mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133,607 to 137,030
13567
Group
Condition
mRNA
_5195
mRNA
_5196
mRNA
_5197
mRNA
_5198
mRNA
_5199
13563
13564
13565
13566
13567
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.8
-0.2
-0.1
+0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.7
-0.2
+0.1
+0.6
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-2.4
+0.1
+0.2
+0.6
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.1
-0.3
-0.1
+0.4
growth on oleic acid
YNB Glucose
+0.3
-0.2
-0.0
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.1
+0.4
-0.3
auxotrophy
Dropout Complete
-0.0
-0.2
-0.2
+0.1
+0.1
auxotrophy
YNB Glucose
+0.1
-0.4
-0.2
+0.4
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.0
+0.1
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.2
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.5
-0.0
+0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.4
-0.2
-0.0
+0.1
-0.1
growth on ypd
YPD
+0.4
+0.1
-0.3
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
-0.2
+0.0
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.6
+0.1
+0.1
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.5
-0.1
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
+0.1
+0.2
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.1
+0.2
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.5
+0.2
-0.0
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.2
+0.2
+0.9
remove
mRNA_5195
plot
remove
mRNA_5196
plot
remove
mRNA_5197
remove
mRNA_5198
plot
remove
mRNA_5199
plot