Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13564 and 13565 are separated by 117 nucleotides13565 and 13566 are separated by 681 nucleotides13566 and 13567 are separated by 108 nucleotides13567 and 13568 are separated by 303 nucleotides mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126,891 to 128,997 13564 mRNA_5197: 13565 - Hypothetical Protein, at 129,115 to 130,730 13565 mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131,412 to 133,498 13566 mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133,607 to 137,030 13567 mRNA_5200: 13568 - Hypothetical Protein, at 137,334 to 138,235 13568
Group Condition mRNA_5196 mRNA_5197 mRNA_5198 mRNA_5199 mRNA_5200
13564 13565 13566 13567 13568
auxotrophy YNB Glucose -0.4 -0.2 +0.4 -0.2 -0.3
growth on oleic acid YNB Glucose -0.2 -0.0 -0.1 -0.4 +0.0
auxotrophy Dropout Complete -0.2 -0.2 +0.1 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.0 +0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 +0.4 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.4 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 +0.4 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.1 +0.4 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.1 +0.2 +0.1
growth on ypd YPD +0.1 -0.3 +0.0 +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 +0.1 +0.7 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 +0.3 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.0 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 +0.0 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.2 +0.6 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 +0.3 +0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 +0.6 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.2 -0.0 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.2 +0.9 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 +0.6 +0.4 +0.1
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