Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13567 and 13568 are separated by 303 nucleotides13568 and 13569 are separated by 769 nucleotides13569 and 13570 are separated by 307 nucleotides13570 and 13571 are separated by 383 nucleotides mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133,607 to 137,030 13567 mRNA_5200: 13568 - Hypothetical Protein, at 137,334 to 138,235 13568 mRNA_5201: 13569 - K02304 MET8 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase, at 139,005 to 139,988 13569 mRNA_5202: 13570 - K02874 RP-L14, MRPL14, rplN large subunit ribosomal protein L14, at 140,296 to 141,028 13570 mRNA_5203: 13571 - K06709 KDM4, JMJD2, JHDM3 jumonji domain-containing protein 2, at 141,412 to 145,870 13571
Group Condition mRNA_5199 mRNA_5200 mRNA_5201 mRNA_5202 mRNA_5203
13567 13568 13569 13570 13571
auxotrophy YNB Glucose -0.2 -0.3 -3.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -2.7 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 -3.4 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -2.0 N.D. +0.1
growth on oleic acid YNB Glucose -0.4 +0.0 -2.1 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 -2.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.0 -2.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.2 -1.9 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 -1.7 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.1 -1.3 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.8 N.D. -0.2
growth on ypd YPD +0.0 +0.4 -0.8 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.4 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.7 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 +0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.1 -0.4 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.6 -0.5 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 +0.3 N.D. -0.1
auxotrophy Dropout Complete +0.1 -0.3 +1.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.3 +0.7 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.7 N.D. +0.0
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